/* * Copyright 2011, Ben Langmead * * This file is part of Bowtie 2. * * Bowtie 2 is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * Bowtie 2 is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with Bowtie 2. If not, see . */ #ifndef MM_H_ #define MM_H_ /** * mm.h: * * Defines that make it easier to handle files in the two different MM * contexts: i.e. on Linux and Mac where MM is supported and POSIX I/O * functions work as expected, and on Windows where MM is not supported * and where there isn't POSIX I/O, */ #if 0 #ifdef BOWTIE_MM #define MM_FILE_CLOSE(x) if(x > 3) { close(x); } #define MM_READ_RET ssize_t // #define MM_READ read #define MM_SEEK lseek #define MM_FILE int #define MM_FILE_INIT -1 #else #define MM_FILE_CLOSE(x) if(x != NULL) { fclose(x); } #define MM_READ_RET size_t #define MM_SEEK fseek #define MM_FILE FILE* #define MM_FILE_INIT NULL #endif #endif #define MM_READ(file, dest, sz) fread(dest, 1, sz, file) #define MM_IS_IO_ERR(file_hd, ret, count) is_fread_err(file_hd, ret, count) #endif /* MM_H_ */